The PedcBioPortal for Cancer Genomics is an instance of the cBioPortal, originally developed at Memorial Sloan-Kettering Cancer Center (MSK), with an emphasis on pediatric cancers. PedcBioPortal supports the curation and pan-cancer integration of public, pediatric cancer genomics data sets as well as ‘open science’ initiatives of consortia-based efforts including the Children’s Brain Tumor Tissue Consortium (CBTTC), the Pediatric NeuroOncology Consortium (PNOC) and the St. Baldrick Pediatric Stand Up 2 Cancer Dream Team. The cBioPortal software is now available under an open source license via GitHub. The software is now developed and maintained by a multi-institutional team, consisting of MSK, the Dana Farber Cancer Institute, Princess Margaret Cancer Centre in Toronto, Children’s Hospital of Philadelphia, The Hyve in the Netherlands, and Bilkent University in Ankara, Turkey.
Memorial Sloan Kettering Cancer Center
- Jianjiong Gao
- Benjamin Gross
- S. Onur Sumer
- Yichao Sun
- Hongxin Zhang
- Adam Abeshouse
- Ritika Kundra
- Ino de Bruijn
- Robert Sheridan
- Angelica Ochoa
- Aaron Lisman
- Manda Wilson
- Avery Wang
- Jing Su
- Ramyasree Madupuri
- Gaofei Zhao
- Xiang Li
- Nikolaus Schultz
Dana-Farber Cancer Institute
- Ethan Cerami
- Ersin Ciftci
- Tali Mazor
- Augustin Luna
- James Lindsay
- Priti Kumari
- Chris Sander
Princess Margaret Cancer Centre, Toronto
- Kelsey Zhu
- Trevor Pugh
Children’s Hospital of Philadelphia
- Pichai Raman
- Karthik Kalletla
- Anthony Cros
- Komal Rathi
- John Maris
- Adam Resnick
The Hyve
- Pieter Lukasse
- Fedde Schaeffer
- Sander Tan
- Oleguer Plantalech
- Pim van Nierop
- Riza Nugraha
- Sjoerd van Hagen
- Kees van Bochove
Bilkent University
- Ugur Dogrusoz
- Istemi Bahceci
- Kaan Sancak
Weill Cornell Medicine
- Alexandros Sigaras
- Olivier Elemento
Alumni
- B. Arman Aksoy
- Caitlin Byrne
- Hsiao-Wei Chen
- Fred Criscuolo
- Leonard Dervishi
- Gideon Dresdner
- Andy Dufilie
- Catherine Del Vecchio Fitz
- Arthur Goldberg
- Zachary Heins
- Michael Heuer
- Anders Jacobsen
- Erik Larsson
- Dong Li
- Tamba Monrose
- Peter Kok
- Irina Pulyakhina
- M. Furkan Sahin
- Jiaojiao Wang
- Stuart Watt
- James Xu
- Dionne Zaal
Funding for the cBioPortal for Cancer Genomics is or has been provided by:
Current:
- ITCR, through a U24 grant (NCI-U24CA220457)
- Marie-José and Henry R. Kravis Center for Molecular Oncology at MSK
- Dana Farber Cancer Institute
- American Association for Cancer Research through AACR Project GENIE
- POETIC Consortium
- Robertson Foundation
Past:
- Stand Up 2 Cancer
- The Ben & Catherine Ivy Foundation
- NCI, as a TCGA Genome Data Analysis Center (GDAC) (NCI-U24CA143840)
- NCRR, as the National Resource for Network Biology (NRNB) Research Resource (RR 031228-02)
- Starr Cancer Consortium
- Breast Cancer Research Foundation
- Adenoid Cystic Carcinoma Research Foundation
- Prostate Cancer Foundation
Data/Support for PedcBioPortal
<img src=”https://github.com/d3b-center/pedcbioportal/blob/master/portal/src/main/webapp/images/chop.png?raw=true” width=”140” height=”50” style=padding:5px;” hspace=”15”>
<img src=”https://github.com/d3b-center/pedcbioportal/blob/master/portal/src/main/webapp/images/su2c_logo.png?raw=true” width=”140” height=”50” hspace=”15” style=padding:5px;”>
<img src=”https://github.com/d3b-center/pedcbioportal/blob/master/portal/src/main/webapp/images/mskcc_logo.jpeg?raw=true” width=”140” height=”50” hspace=”15” style=padding:5px;”>
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<img src=”https://github.com/d3b-center/pedcbioportal/blob/master/portal/src/main/webapp/images/pmcp_logo.png?raw=true” width=”140” height=”50” hspace=”15” style=padding:5px;”>
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<img src=”https://github.com/d3b-center/pedcbioportal/blob/master/portal/src/main/webapp/images/g4gh.jpeg?raw=true” width=”140” height=”50” hspace=”15” style=padding:5px;”>
<img src=”https://github.com/d3b-center/pedcbioportal/blob/master/portal/src/main/webapp/images/dktk_allgemein_klein.jpeg?raw=true” width=”140” height=”50” hspace=”15” style=padding:5px;”>
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